Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015787581.1_cds_XP_016504023.1_177
CDS Infomation

[gene=LOC107822012] [db_xref=GeneID:107822012] [protein=3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like] [protein_id=XP_016504023.1] [location=join(12696..12894,14118..14323,14397..14600,14697..14807,14900..14995,15326..15371,15449..15528,15690..15758,15896..15980,16473..16627,16720..16800,17550..17609,17961..18077)] [gbkey=CDS]
Sequence

ATGTCTGCATCGGCTGTATCGTCATGGTCAATAGCTGCATGCATGTCAGCTGCTTGTGAA
AATGAGCAAGAGAAGAACTTTTTTAATAGGAATAAGACTTGCAATGGCCTTTCATTTTCC
AATTCTTGTTTAGTGAGAAATGAGTGTTCTTCAATCTTTGGATGTTGGAGGAGTAAACAC
AGGCGCAATCCCACTTCAGGTGGCATAAGGGCTGTTGCTGTACAACCAGTGATGGAAGTT
ACATCAAAGAAGAAACCGCCAACCAAGGAAAGGCGAGTGGTTGTGACCGGGATGGGGGTG
GTCACGCCAATTGGTCATGACCCCGATGTGTTCTATGAAAACCTGCTCCAGGGCATCAGT
GGCATAAGCGAGATAGAAGCTTTTGATTGTTCGCATTTTCCAACAAGAATTGCTGGAGAG
ATCAAGTCTTTCTCTACTGCTGGCTGGGTTGCGCCTAAACTTTCTAAAAGAATGGACAAG
TTCATGCTTTACATGTTAACAGCTGGTAAGAAGGCATTATCAGACGGTGGAATTACTGAA
GACGTAATGGAAGAATTGGATAAAACAAAATGTGGAGTTTTGATTGGCTCTGCTATGGGT
GGGATGAAGGTCTTCAATGATGCAATAGAATCTTTAAGGATTTCTTATAAGAAGATGAAT
CCTTTTTGTGTACCATTTGCCACTACAAACATGGGCTCTGCGATGCTTGCCATGGACTTG
GGATGGATGGGTCCAAATTATTCAATTTCAACGGCATGTGCGACGAGTAACTTCTGCATA
TTGAATGCTGCTAACCATATCATTAGAGGTGAAGCTGATGTGATGCTCTGTGGTGGATCT
GATGCAGTAATTATACCAATTGGATTGGGAGGTTTTGTTGCATGCAGAGCGCTTTCCCAG
AGAAACAGTGACCCTACTCGAGCTTCTCGGCCTTGGGATAGTAATCGTGATGGGTTTGTC
ATGGGTGAAGGAGCCGGAGTACTGCTTCTAGAAGAACTTGAGCATGCCAAGAGAAGAGGT
GCAACTATCTATGCTGAATTTCTTGGTGGAAGCTTTACTTGTGATGCTTATCACATGACA
GAGCCTCATCCTGAAGGAGCCGGCGTTATCTTATGCATAGAAAAGGCCTTAGCTCAGTCT
GGTGTAGCCAAGGAAGATGTGAACTACATTAATGCACATGCCACATCCACACCAGCGGGG
GATCTCAGAGAGTACCAAGCTCTTGTACATTGTTTTGGTCAGAACCCGGAGTTACGAGTG
AACTCTACGAAGTCTATGATCGGTCACCTGCTAGGCGCTGCTGGTGCTGTCGAGGCAGTA
GCAACCGTTCAGGCAATACGAAGTGGATGGGTTCATCCAAATATAAATCTTGAAAACCCA
GAAGAGGGTGTGGATACAAATTTACTCGTTGGTCCCAAAAAAGAAAGATTGGATGTTAAG
GTGGCATTATCTAACTCATTTGGATTTGGTGGCCATAATTCATCGATCTTATTTGCTCCT
TACAAGTAG

Peptide Sequence

PEP ID

XP_016504023.1
PEP Infomation

PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like [Nicotiana tabacum]
Sequence

MSASAVSSWSIAACMSAACENEQEKNFFNRNKTCNGLSFSNSCLVRNECSSIFGCWRSKH
RRNPTSGGIRAVAVQPVMEVTSKKKPPTKERRVVVTGMGVVTPIGHDPDVFYENLLQGIS
GISEIEAFDCSHFPTRIAGEIKSFSTAGWVAPKLSKRMDKFMLYMLTAGKKALSDGGITE
DVMEELDKTKCGVLIGSAMGGMKVFNDAIESLRISYKKMNPFCVPFATTNMGSAMLAMDL
GWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAVIIPIGLGGFVACRALSQ
RNSDPTRASRPWDSNRDGFVMGEGAGVLLLEELEHAKRRGATIYAEFLGGSFTCDAYHMT
EPHPEGAGVILCIEKALAQSGVAKEDVNYINAHATSTPAGDLREYQALVHCFGQNPELRV
NSTKSMIGHLLGAAGAVEAVATVQAIRSGWVHPNINLENPEEGVDTNLLVGPKKERLDVK
VALSNSFGFGGHNSSILFAPYK

Transcript Sequence

Gene sequence data has not been registered.